Sequence Similarity Clusters for the Entities in PDB 1GRU

Entity #1 | Chains: A,B,C,D,E,F,G,H,I,J,K,L,M,N
GROEL protein, length: 547 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 21 21 80
95 % 44 45 13
90 % 44 45 14
70 % 44 45 21
50 % 51 52 18
40 % 51 52 30
30 % 51 52 49
Entity #2 | Chains: O,P,Q,R,S,T,U
GROES protein, length: 97 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 15 15 212
95 % 15 15 290
90 % 15 15 304
70 % 15 15 355
50 % 21 21 264
40 % 21 21 275
30 % 21 21 287

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures