Sequence Similarity Clusters for the Entities in PDB 1GRN

Entity #1 | Chains: A
PROTEIN (GTP BINDING PROTEIN) protein, length: 191 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 3 22 1367
95 % 5 37 891 Flexibility: Low
Max RMSD: 3.7, Avg RMSD: 1.6
PDBFlex
90 % 5 37 924
70 % 21 78 309
50 % 49 137 186
40 % 50 138 202
30 % 388 763 16
Entity #2 | Chains: B
PROTEIN (RHO GTPASE ACTIVATING PROTEIN) protein, length: 203 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 20871
95 % 2 3 14039 Flexibility: Low
Max RMSD: 1.2, Avg RMSD: 0.8
PDBFlex
90 % 2 3 13768
70 % 2 3 12912
50 % 2 3 11500
40 % 2 3 10423
30 % 2 3 9045

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.