Sequence Similarity Clusters for the Entities in PDB 1GRN

Entity #1 | Chains: A
PROTEIN (GTP BINDING PROTEIN) protein, length: 191 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 3 22 1419
95 % 5 37 911 Flexibility: Low
Max RMSD: 3.7, Avg RMSD: 1.6
PDBFlex
90 % 5 37 944
70 % 21 78 324
50 % 49 137 193
40 % 50 138 208
30 % 397 782 16
Entity #2 | Chains: B
PROTEIN (RHO GTPASE ACTIVATING PROTEIN) protein, length: 203 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 21559
95 % 2 3 14475 Flexibility: Low
Max RMSD: 1.2, Avg RMSD: 0.8
PDBFlex
90 % 2 3 14204
70 % 2 3 13321
50 % 2 3 11847
40 % 2 3 10731
30 % 2 3 9327

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.