Sequence Similarity Clusters for the Entities in PDB 1GRN

Entity #1 | Chains: A
PROTEIN (GTP BINDING PROTEIN) protein, length: 191 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 3 26 1382
95 % 5 39 914 Flexibility: Low
Max RMSD: 3.7, Avg RMSD: 1.6
PDBFlex
90 % 5 39 943
70 % 21 82 332
50 % 52 145 194
40 % 52 145 210
30 % 436 842 13
Entity #2 | Chains: B
PROTEIN (RHO GTPASE ACTIVATING PROTEIN) protein, length: 203 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 17778
95 % 2 3 15682 Flexibility: Low
Max RMSD: 1.2, Avg RMSD: 0.8
PDBFlex
90 % 2 3 15351
70 % 2 3 14363
50 % 2 3 12678
40 % 2 3 11375
30 % 3 4 8695

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures