Sequence Similarity Clusters for the Entities in PDB 1GQZ

Entity #1 | Chains: A
DIAMINOPIMELATE EPIMERASE protein, length: 274 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 3 3 26959
95 % 3 6 12085 Flexibility: Low
Max RMSD: 3.0, Avg RMSD: 1.7
PDBFlex
90 % 3 6 11914
70 % 3 8 6767
50 % 3 9 5289
40 % 3 11 2491
30 % 3 16 1770

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures