Sequence Similarity Clusters for the Entities in PDB 1GQW

Entity #1 | Chains: A,B
ALPHA-KETOGLUTARATE-DEPENDENT TAURINE DIOXYGENASE protein, length: 283 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 4 4 5781
95 % 4 4 6022 Flexibility: Low
Max RMSD: 2.1, Avg RMSD: 0.9
PDBFlex
90 % 4 4 6022
70 % 4 4 5875
50 % 7 7 2623
40 % 24 24 767
30 % 25 25 731

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures