Sequence Similarity Clusters for the Entities in PDB 1GQV

Entity #1 | Chains: A
EOSINOPHIL-DERIVED NEUROTOXIN protein, length: 135 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 10 6375
95 % 1 11 5880 Flexibility: Low
Max RMSD: 1.1, Avg RMSD: 0.5
PDBFlex
90 % 1 11 5889
70 % 1 11 5755
50 % 1 22 2039
40 % 6 372 89
30 % 6 463 65

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures