Sequence Similarity Clusters for the Entities in PDB 1GQT

Entity #1 | Chains: A,B,C,D
RIBOKINASE protein, length: 309 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 5 5880
95 % 2 5 6539 Flexibility: Low
Max RMSD: 1.3, Avg RMSD: 0.7
PDBFlex
90 % 2 5 6534
70 % 2 5 6369
50 % 3 8 1703
40 % 5 10 1548
30 % 16 24 722

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures