Sequence Similarity Clusters for the Entities in PDB 1GQQ

Entity #1 | Chains: A,B
UDP-N-ACETYLMURAMATE-L-ALANINE LIGASE protein, length: 475 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 4 4 7905
95 % 4 4 8388 Flexibility: Medium
Max RMSD: 7.8, Avg RMSD: 3.4
PDBFlex
90 % 4 4 8330
70 % 4 4 8016
50 % 6 6 5078
40 % 6 6 4803
30 % 7 7 4121

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.