Sequence Similarity Clusters for the Entities in PDB 1GQP

Entity #1 | Chains: A,B
DOC1/APC10 protein, length: 221 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 40672
95 % 1 1 34280 Flexibility: Low
Max RMSD: 0.9, Avg RMSD: 0.9
PDBFlex
90 % 1 1 32789
70 % 1 1 29260
50 % 1 1 24990
40 % 1 1 21941
30 % 1 1 18316

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures