Sequence Similarity Clusters for the Entities in PDB 1GQO

Entity #1 | Chains: A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,X,Y
DEHYDROQUINASE protein, length: 143 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 1930
95 % 1 1 2503 Flexibility: Low
Max RMSD: 2.5, Avg RMSD: 0.8
PDBFlex
90 % 1 1 2555
70 % 1 1 2542
50 % 22 42 139
40 % 32 59 112
30 % 32 59 122

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.