Sequence Similarity Clusters for the Entities in PDB 1GQO

Entity #1 | Chains: A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,X,Y
DEHYDROQUINASE protein, length: 143 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 2108
95 % 1 1 2686 Flexibility: Low
Max RMSD: 2.5, Avg RMSD: 0.7
PDBFlex
90 % 1 1 2739
70 % 1 1 2726
50 % 26 47 137
40 % 36 64 108
30 % 36 64 121

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures