Sequence Similarity Clusters for the Entities in PDB 1GQN

Entity #1 | Chains: A
3-DEHYDROQUINATE DEHYDRATASE protein, length: 252 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 3 10436
95 % 6 8 3549 Flexibility: Low
Max RMSD: 1.3, Avg RMSD: 0.5
PDBFlex
90 % 6 8 3599
70 % 17 22 1063
50 % 17 24 950
40 % 17 26 920
30 % 18 27 883

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures