Sequence Similarity Clusters for the Entities in PDB 1GQM

Entity #1 | Chains: A,B,C,D,E,F,G,H,I,J,K,L
CALGRANULIN C protein, length: 91 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 5 7 1265
95 % 6 8 1593 Flexibility: Low
Max RMSD: 5.1, Avg RMSD: 2.7
PDBFlex
90 % 6 8 1624
70 % 6 8 1628
50 % 6 8 1678
40 % 73 120 177
30 % 90 139 160

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures