Sequence Similarity Clusters for the Entities in PDB 1GQM

Entity #1 | Chains: A,B,C,D,E,F,G,H,I,J,K,L
CALGRANULIN C protein, length: 91 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 5 7 1214
95 % 6 8 1539 Flexibility: Low
Max RMSD: 5.1, Avg RMSD: 2.7
PDBFlex
90 % 6 8 1570
70 % 6 8 1565
50 % 6 8 1608
40 % 73 120 172
30 % 90 139 156

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.