Sequence Similarity Clusters for the Entities in PDB 1GQL

Entity #1 | Chains: A,B
ALPHA-D-GLUCURONIDASE protein, length: 708 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 4 7944
95 % 3 5 6809 Flexibility: No
Max RMSD: 0.5, Avg RMSD: 0.3
PDBFlex
90 % 3 5 6797
70 % 3 5 6615
50 % 3 5 6166
40 % 4 12 3552
30 % 4 12 3321

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures