Sequence Similarity Clusters for the Entities in PDB 1GQK

Entity #1 | Chains: A,B
ALPHA-D-GLUCURONIDASE protein, length: 708 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 4 5 7369
95 % 4 5 7461 Flexibility: No
Max RMSD: 0.5, Avg RMSD: 0.3
PDBFlex
90 % 4 5 7417
70 % 4 5 7211
50 % 4 5 6658
40 % 8 12 3557
30 % 8 12 3267

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures