Sequence Similarity Clusters for the Entities in PDB 1GQC

Entity #1 | Chains: A,B
3-DEOXY-MANNO-OCTULOSONATE CYTIDYLYLTRANSFERASE protein, length: 245 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 6 8 3925
95 % 6 8 4275 Flexibility: Low
Max RMSD: 1.1, Avg RMSD: 0.5
PDBFlex
90 % 6 8 4319
70 % 6 8 4228
50 % 13 18 1391
40 % 16 21 1251
30 % 16 21 1249

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures