Sequence Similarity Clusters for the Entities in PDB 1GQC

Entity #1 | Chains: A,B
3-DEOXY-MANNO-OCTULOSONATE CYTIDYLYLTRANSFERASE protein, length: 245 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 6 8 3340
95 % 6 8 4115 Flexibility: Low
Max RMSD: 1.1, Avg RMSD: 0.5
PDBFlex
90 % 6 8 4145
70 % 6 8 4084
50 % 6 8 3948
40 % 16 21 1190
30 % 16 21 1167

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.