Sequence Similarity Clusters for the Entities in PDB 1GQ9

Entity #1 | Chains: A,B
3-DEOXY-MANNO-OCTULOSONATE CYTIDYLYLTRANSFERASE protein, length: 245 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 8 8 3481
95 % 8 8 4275 Flexibility: Low
Max RMSD: 1.1, Avg RMSD: 0.5
PDBFlex
90 % 8 8 4314
70 % 8 8 4238
50 % 8 8 4084
40 % 19 21 1233
30 % 19 21 1210

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures