Sequence Similarity Clusters for the Entities in PDB 1GPZ

Entity #1 | Chains: A,B
COMPLEMENT C1R COMPONENT protein, length: 399 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 32337
95 % 1 1 27937 Flexibility: Low
Max RMSD: 1.2, Avg RMSD: 1.2
PDBFlex
90 % 1 1 26873
70 % 1 1 24262
50 % 1 1 20809
40 % 2 2 15355
30 % 6 6 5640

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures