Sequence Similarity Clusters for the Entities in PDB 1GPZ

Entity #1 | Chains: A,B
COMPLEMENT C1R COMPONENT protein, length: 399 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 34382
95 % 1 1 27535 Flexibility: Low
Max RMSD: 1.2, Avg RMSD: 1.2
PDBFlex
90 % 1 1 26585
70 % 1 1 24072
50 % 1 1 20723
40 % 2 2 15358
30 % 5 5 6234

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures