Sequence Similarity Clusters for the Entities in PDB 1GPY

Entity #1 | Chains: A
GLYCOGEN PHOSPHORYLASE B protein, length: 842 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 125 130 197
95 % 184 195 138 Flexibility: Low
Max RMSD: 5.0, Avg RMSD: 1.3
PDBFlex
90 % 184 195 146
70 % 196 215 144
50 % 196 215 178
40 % 208 232 164
30 % 208 232 178

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures