Sequence Similarity Clusters for the Entities in PDB 1GPW

Entity #1 | Chains: A,C,E
HISF PROTEIN protein, length: 253 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 25867
95 % 8 8 4198
90 % 23 23 1116
70 % 23 23 1154
50 % 30 30 942
40 % 30 30 968
30 % 65 68 494
Entity #2 | Chains: B,D,F
AMIDOTRANSFERASE HISH protein, length: 201 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 3 4 6899
95 % 4 5 5532
90 % 4 5 5538
70 % 4 5 5423
50 % 4 5 5128
40 % 4 5 4831
30 % 6 7 3556

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.