Sequence Similarity Clusters for the Entities in PDB 1GPU

Entity #1 | Chains: A,B
TRANSKETOLASE 1 protein, length: 680 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 6 4337
95 % 2 7 4438 Flexibility: No
Max RMSD: 0.4, Avg RMSD: 0.3
PDBFlex
90 % 2 7 4464
70 % 2 7 4391
50 % 20 34 853
40 % 24 38 827
30 % 24 38 817

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.