Sequence Similarity Clusters for the Entities in PDB 1GPT

Entity #1 | Chains: A
GAMMA-1-H THIONIN protein, length: 47 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 74809
95 % 1 1 51935
90 % 1 1 49237
70 % 2 2 31646
50 % 3 3 19352
40 % 21 21 917
30 % 22 22 885

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures