Sequence Similarity Clusters for the Entities in PDB 1GPS

Entity #1 | Chains: A
GAMMA-1-P THIONIN protein, length: 47 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 75636
95 % 1 1 52496
90 % 1 1 49750
70 % 1 2 31975
50 % 2 3 19546
40 % 20 21 921
30 % 21 22 894

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures