Sequence Similarity Clusters for the Entities in PDB 1GPQ

Entity #1 | Chains: A,B
INHIBITOR OF VERTEBRATE LYSOZYME protein, length: 135 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 43042
95 % 1 2 14080
90 % 1 2 13820
70 % 1 2 12957
50 % 1 2 11552
40 % 1 2 10479
30 % 1 2 9075
Entity #2 | Chains: C,D
LYSOZYME C protein, length: 129 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 198 633 3
95 % 204 686 4
90 % 208 703 5
70 % 227 919 6
50 % 227 927 6
40 % 229 961 11
30 % 229 961 19

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.