Sequence Similarity Clusters for the Entities in PDB 1GPQ

Entity #1 | Chains: A,B
INHIBITOR OF VERTEBRATE LYSOZYME protein, length: 135 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 42411
95 % 1 2 13843
90 % 1 2 13592
70 % 1 2 12752
50 % 1 2 11390
40 % 1 2 10329
30 % 1 2 8963
Entity #2 | Chains: C,D
LYSOZYME C protein, length: 129 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 195 626 3
95 % 201 679 4
90 % 205 696 5
70 % 224 912 6
50 % 224 920 6
40 % 226 954 10
30 % 226 954 18

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.