Sequence Similarity Clusters for the Entities in PDB 1GPM

Entity #1 | Chains: A,B,C,D
GMP SYNTHETASE protein, length: 525 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 20541
95 % 1 1 18577 Flexibility: Low
Max RMSD: 1.3, Avg RMSD: 1.0
PDBFlex
90 % 1 1 18081
70 % 1 1 16698
50 % 1 5 2975
40 % 1 8 2319
30 % 1 8 2204

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures