Sequence Similarity Clusters for the Entities in PDB 1GPM

Entity #1 | Chains: A,B,C,D
GMP SYNTHETASE protein, length: 525 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 17387
95 % 1 1 15975 Flexibility: Low
Max RMSD: 0.9, Avg RMSD: 0.7
PDBFlex
90 % 1 1 15680
70 % 1 1 14701
50 % 1 5 2799
40 % 1 8 2232
30 % 1 8 2128

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures