Sequence Similarity Clusters for the Entities in PDB 1GPI

Entity #1 | Chains: A
EXOGLUCANASE I protein, length: 431 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 5 16240
95 % 1 5 15088 Flexibility: No
Max RMSD: 0.3, Avg RMSD: 0.2
PDBFlex
90 % 1 5 14788
70 % 1 5 13791
50 % 11 76 486
40 % 12 88 449
30 % 12 88 451

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures


ACTION - (A) Select for download / view details OR (B) Select two chains for comparison
Rank PDB ID Entity ID Chains Description Details Taxonomy EC Number
1 1GPI 1 A EXOGLUCANASE I LINK NAG-ASN (NAG 435 AND ND2 ASN 286) CISPEP TYR 378, CISPEP PRO 379, SSBOND 1 CYS 19 CYS 25, SSBOND 2 CYS 50 CYS 71 CATALYTIC MODULE, RESIDUES 19-450 5306
2 1H46 1 X EXOGLUCANASE I BETA-BLOCKER (R)-PROPRANOLOL CATALYTIC MODULE, RESIDUES 19-449 5306 3.2.1.91 | Details
3 1Z3V 1 A cellulase Catalytic module 5306
4 1Z3T 1 A cellulase Catalytic module 5306
5 1Z3W 1 A cellulase Catalytic module 5306