Sequence Similarity Clusters for the Entities in PDB 1GPE

Entity #1 | Chains: A,B
PROTEIN (GLUCOSE OXIDASE) protein, length: 587 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 31452
95 % 1 1 25818 Flexibility: No
Max RMSD: 0.1, Avg RMSD: 0.1
PDBFlex
90 % 1 1 24946
70 % 1 1 22665
50 % 4 7 7291
40 % 4 7 6777
30 % 6 9 5053

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures