Sequence Similarity Clusters for the Entities in PDB 1GPE

Entity #1 | Chains: A,B
PROTEIN (GLUCOSE OXIDASE) protein, length: 587 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 48056
95 % 1 1 39917 Flexibility: No
Max RMSD: 0.1, Avg RMSD: 0.1
PDBFlex
90 % 1 1 38016
70 % 1 1 33624
50 % 4 7 8931
40 % 4 7 8114
30 % 9 24 1357

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures