Sequence Similarity Clusters for the Entities in PDB 1GPE

Entity #1 | Chains: A,B
PROTEIN (GLUCOSE OXIDASE) protein, length: 587 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 32719
95 % 1 1 28248 Flexibility: No
Max RMSD: 0.1, Avg RMSD: 0.1
PDBFlex
90 % 1 1 27152
70 % 1 1 24504
50 % 4 7 8540
40 % 4 7 7774
30 % 9 24 1294

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures