Sequence Similarity Clusters for the Entities in PDB 1GPC

Entity #1 | Chains: A
PROTEIN (CORE GP32) protein, length: 218 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 53351
95 % 1 1 43930
90 % 2 3 17585
70 % 2 3 16270
50 % 2 3 14215
40 % 2 3 12695
30 % 2 3 10700

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures