Sequence Similarity Clusters for the Entities in PDB 1GPC

Entity #1 | Chains: A
PROTEIN (CORE GP32) protein, length: 218 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 60525
95 % 1 1 42517
90 % 2 3 17796
70 % 2 3 16522
50 % 2 3 14381
40 % 2 3 12836
30 % 2 3 11006

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures