Sequence Similarity Clusters for the Entities in PDB 1GPA

Entity #1 | Chains: A,B,C,D
GLYCOGEN PHOSPHORYLASE A protein, length: 842 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 56 59 420
95 % 185 189 136 Flexibility: Low
Max RMSD: 5.0, Avg RMSD: 1.2
PDBFlex
90 % 185 189 146
70 % 202 209 141
50 % 202 209 171
40 % 216 226 158
30 % 216 226 176

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.