Sequence Similarity Clusters for the Entities in PDB 1GP3

Entity #1 | Chains: A
CATION-INDEPENDENT MANNOSE-6-PHOSPHATE RECEPTOR protein, length: 143 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 4 5 10680
95 % 4 10 6023 Flexibility: Low
Max RMSD: 1.0, Avg RMSD: 0.7
PDBFlex
90 % 4 10 6020
70 % 4 10 5873
50 % 4 13 4269
40 % 4 13 4078
30 % 4 15 3336

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures