Sequence Similarity Clusters for the Entities in PDB 1GP0

Entity #1 | Chains: A
CATION-INDEPENDENT MANNOSE-6-PHOSPHATE RECEPTOR protein, length: 143 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 5 10302
95 % 1 10 5787 Flexibility: Low
Max RMSD: 1.0, Avg RMSD: 0.7
PDBFlex
90 % 1 10 5783
70 % 1 10 5662
50 % 1 13 4121
40 % 1 13 3938
30 % 1 15 3227

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.