Sequence Similarity Clusters for the Entities in PDB 1GOX

Entity #1 | Chains: A
(S)-2-HYDROXY-ACID OXIDASE, PEROXISOMAL protein, length: 370 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 3 26310
95 % 1 4 14117 Flexibility: Low
Max RMSD: 2.1, Avg RMSD: 1.5
PDBFlex
90 % 1 4 13901
70 % 1 4 13081
50 % 5 9 4805
40 % 10 18 1906
30 % 16 26 868

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures