Sequence Similarity Clusters for the Entities in PDB 1GOX

Entity #1 | Chains: A
(S)-2-HYDROXY-ACID OXIDASE, PEROXISOMAL protein, length: 370 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 3 25895
95 % 1 4 13915 Flexibility: Low
Max RMSD: 2.1, Avg RMSD: 1.5
PDBFlex
90 % 1 4 13696
70 % 1 4 12884
50 % 5 9 4731
40 % 10 18 1870
30 % 16 26 861

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.