Sequence Similarity Clusters for the Entities in PDB 1GOT

Entity #1 | Chains: A
GT-ALPHA/GI-ALPHA CHIMERA protein, length: 350 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 3 13490
95 % 1 4 7881
90 % 3 7 3990
70 % 14 66 357
50 % 14 77 345
40 % 14 95 317
30 % 14 97 312
Entity #2 | Chains: B
GT-BETA protein, length: 340 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 5 13515
95 % 2 30 1442
90 % 2 30 1466
70 % 2 30 1503
50 % 3 31 1452
40 % 3 33 1389
30 % 3 33 1368
Entity #3 | Chains: G
GT-GAMMA protein, length: 73 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 66371
95 % 1 1 46002
90 % 1 1 43780
70 % 1 1 38664
50 % 1 1 33129
40 % 1 1 29200
30 % 1 1 24623

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.