Sequence Similarity Clusters for the Entities in PDB 1GOT

Entity #1 | Chains: A
GT-ALPHA/GI-ALPHA CHIMERA protein, length: 350 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 3 13845
95 % 1 4 8098
90 % 3 7 4114
70 % 14 66 384
50 % 14 77 388
40 % 14 95 329
30 % 14 97 325
Entity #2 | Chains: B
GT-BETA protein, length: 340 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 5 13872
95 % 2 30 1493
90 % 2 30 1517
70 % 2 30 1553
50 % 3 31 1496
40 % 3 33 1432
30 % 3 33 1406
Entity #3 | Chains: G
GT-GAMMA protein, length: 73 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 68009
95 % 1 1 47128
90 % 1 1 44818
70 % 1 1 39523
50 % 1 1 33854
40 % 1 1 29851
30 % 1 1 25181

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.