Sequence Similarity Clusters for the Entities in PDB 1GOM

Entity #1 | Chains: A
ENDO-1,4-BETA-XYLANASE protein, length: 303 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 8 9 8458
95 % 9 11 6421 Flexibility: No
Max RMSD: 1.1, Avg RMSD: 0.4
PDBFlex
90 % 11 13 4803
70 % 11 22 2541
50 % 28 56 973
40 % 66 131 266
30 % 70 135 273

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures