Sequence Similarity Clusters for the Entities in PDB 1GO3

Entity #1 | Chains: E,M
DNA-DIRECTED RNA POLYMERASE SUBUNIT E protein, length: 187 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 40846
95 % 1 1 30987
90 % 1 1 29670
70 % 1 1 26588
50 % 1 3 11490
40 % 1 10 3423
30 % 1 10 3195
Entity #2 | Chains: F,N
DNA-DIRECTED RNA POLYMERASE SUBUNIT F protein, length: 107 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 45125
95 % 1 1 33776 Flexibility: Low
Max RMSD: 0.6, Avg RMSD: 0.6
PDBFlex
90 % 1 1 32309
70 % 1 1 28826
50 % 1 1 24662
40 % 1 3 10643
30 % 1 10 3232

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.