Sequence Similarity Clusters for the Entities in PDB 1GNZ

Entity #1 | Chains: A
GSI-B4 ISOLECTIN protein, length: 257 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 59961
95 % 2 2 23440 Flexibility: Low
Max RMSD: 0.6, Avg RMSD: 0.6
PDBFlex
90 % 2 2 22732
70 % 2 2 20824
50 % 12 13 2049
40 % 128 161 102
30 % 128 161 114

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures