Sequence Similarity Clusters for the Entities in PDB 1GNU

Entity #1 | Chains: A
GABARAP protein, length: 117 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 8 7355
95 % 2 9 5148 Flexibility: Low
Max RMSD: 1.7, Avg RMSD: 1.0
PDBFlex
90 % 2 10 4466
70 % 6 16 2228
50 % 6 28 1230
40 % 16 70 428
30 % 16 71 423

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.