Sequence Similarity Clusters for the Entities in PDB 1GNU

Entity #1 | Chains: A
GABARAP protein, length: 117 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 9 5622
95 % 2 10 4056 Flexibility: Low
Max RMSD: 1.7, Avg RMSD: 1.0
PDBFlex
90 % 2 11 3694
70 % 6 20 1652
50 % 6 33 1053
40 % 16 75 430
30 % 16 76 427

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures