Sequence Similarity Clusters for the Entities in PDB 1GNU

Entity #1 | Chains: A
GABARAP protein, length: 117 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 8 7255
95 % 2 9 5045 Flexibility: Low
Max RMSD: 1.7, Avg RMSD: 1.0
PDBFlex
90 % 2 10 4398
70 % 6 16 2209
50 % 6 28 1220
40 % 16 70 421
30 % 16 71 416

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.