Sequence Similarity Clusters for the Entities in PDB 1GNL

Entity #1 | Chains: A,B
HYBRID CLUSTER PROTEIN protein, length: 544 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 4 9213
95 % 1 4 9153 Flexibility: No
Max RMSD: 0.5, Avg RMSD: 0.3
PDBFlex
90 % 1 4 9057
70 % 1 4 8697
50 % 1 10 4640
40 % 1 10 4382
30 % 1 10 3949

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures