Sequence Similarity Clusters for the Entities in PDB 1GNH

Entity #1 | Chains: A,B,C,D,E,F,G,H,I,J
C-REACTIVE PROTEIN protein, length: 206 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 6 6 392
95 % 6 6 539 Flexibility: No
Max RMSD: 1.8, Avg RMSD: 0.4
PDBFlex
90 % 6 6 566
70 % 6 6 604
50 % 19 19 277
40 % 19 19 294
30 % 21 21 298

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures