Sequence Similarity Clusters for the Entities in PDB 1GNG

Entity #1 | Chains: A,B
GLYCOGEN SYNTHASE KINASE-3 BETA protein, length: 378 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 39 56 292
95 % 39 62 342 Flexibility: Low
Max RMSD: 2.1, Avg RMSD: 0.9
PDBFlex
90 % 39 62 363
70 % 39 62 401
50 % 39 63 467
40 % 40 64 503
30 % 2968 4073 2
Entity #2 | Chains: X,Y
FRATTIDE protein, length: 39 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 50711
95 % 1 1 37876 Flexibility: No
Max RMSD: 0.3, Avg RMSD: 0.3
PDBFlex
90 % 1 1 36132
70 % 1 1 32098
50 % 1 1 27422
40 % 1 1 24234
30 % 1 1 20597

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures