Sequence Similarity Clusters for the Entities in PDB 1GNG

Entity #1 | Chains: A,B
GLYCOGEN SYNTHASE KINASE-3 BETA protein, length: 378 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 36 54 343
95 % 36 58 372 Flexibility: Low
Max RMSD: 2.1, Avg RMSD: 0.9
PDBFlex
90 % 36 58 394
70 % 36 58 433
50 % 36 59 502
40 % 37 61 526
30 % 2957 4118 2
Entity #2 | Chains: X,Y
FRATTIDE protein, length: 39 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 30107
95 % 1 1 26186 Flexibility: No
Max RMSD: 0.3, Avg RMSD: 0.3
PDBFlex
90 % 1 1 25265
70 % 1 1 22896
50 % 1 1 19687
40 % 1 1 17386
30 % 1 1 14585

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures