Sequence Similarity Clusters for the Entities in PDB 1GMY

Entity #1 | Chains: A,B,C
CATHEPSIN B protein, length: 261 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 3 10128
95 % 2 5 7527 Flexibility: Low
Max RMSD: 3.3, Avg RMSD: 1.9
PDBFlex
90 % 2 5 7485
70 % 2 18 2340
50 % 5 22 1834
40 % 5 22 1842
30 % 92 248 124

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.