Sequence Similarity Clusters for the Entities in PDB 1GMY

Entity #1 | Chains: A,B,C
CATHEPSIN B protein, length: 261 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 3 10277
95 % 2 5 7650 Flexibility: Low
Max RMSD: 3.3, Avg RMSD: 2.1
PDBFlex
90 % 2 5 7605
70 % 2 18 2363
50 % 5 22 1861
40 % 5 22 1867
30 % 92 248 126

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.