Sequence Similarity Clusters for the Entities in PDB 1GMW

Entity #1 | Chains: A,B,C
UREE protein, length: 143 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 2 10674
95 % 2 4 7243 Flexibility: Low
Max RMSD: 1.3, Avg RMSD: 0.9
PDBFlex
90 % 2 4 7202
70 % 2 4 7016
50 % 2 4 6476
40 % 2 4 6037
30 % 2 4 5404
Entity #2 | Chains: D
UREE protein, length: 143 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 65400
95 % 3 4 7243 Flexibility: Low
Max RMSD: 1.3, Avg RMSD: 0.9
PDBFlex
90 % 3 4 7202
70 % 3 4 7016
50 % 3 4 6476
40 % 3 4 6037
30 % 3 4 5404

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.