Sequence Similarity Clusters for the Entities in PDB 1GMW

Entity #1 | Chains: A,B,C
UREE protein, length: 143 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 3 9583
95 % 2 4 7386 Flexibility: Low
Max RMSD: 1.3, Avg RMSD: 0.9
PDBFlex
90 % 2 4 7346
70 % 2 4 7146
50 % 2 4 6599
40 % 2 4 6117
30 % 2 4 5363
Entity #2 | Chains: D
UREE protein, length: 143 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 3 3 9583
95 % 3 4 7386 Flexibility: Low
Max RMSD: 1.3, Avg RMSD: 0.9
PDBFlex
90 % 3 4 7346
70 % 3 4 7146
50 % 3 4 6599
40 % 3 4 6117
30 % 3 4 5363

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures