Sequence Similarity Clusters for the Entities in PDB 1GMW

Entity #1 | Chains: A,B,C
UREE protein, length: 143 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 2 11098
95 % 2 4 7495 Flexibility: Low
Max RMSD: 1.3, Avg RMSD: 0.9
PDBFlex
90 % 2 4 7457
70 % 2 4 7249
50 % 2 4 6694
40 % 2 4 6234
30 % 2 4 5589
Entity #2 | Chains: D
UREE protein, length: 143 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 67464
95 % 3 4 7495 Flexibility: Low
Max RMSD: 1.3, Avg RMSD: 0.9
PDBFlex
90 % 3 4 7457
70 % 3 4 7249
50 % 3 4 6694
40 % 3 4 6234
30 % 3 4 5589

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures