Sequence Similarity Clusters for the Entities in PDB 1GMV

Entity #1 | Chains: A,B
UREE protein, length: 143 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 44715
95 % 4 4 7272 Flexibility: Low
Max RMSD: 1.3, Avg RMSD: 0.9
PDBFlex
90 % 4 4 7231
70 % 4 4 7044
50 % 4 4 6503
40 % 4 4 6060
30 % 4 4 5424

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures