Sequence Similarity Clusters for the Entities in PDB 1GMQ

Entity #1 | Chains: A,B
RIBONUCLEASE SA protein, length: 96 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 16 22 1217
95 % 17 27 1140 Flexibility: No
Max RMSD: 0.8, Avg RMSD: 0.4
PDBFlex
90 % 17 27 1167
70 % 17 29 1159
50 % 18 36 837
40 % 18 36 848
30 % 18 36 846

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures