Sequence Similarity Clusters for the Entities in PDB 1GMO

Entity #1 | Chains: A,B,C,D,E,F,G,H
HEPATOCYTE GROWTH FACTOR protein, length: 183 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 13 13 1620
95 % 18 18 1277 Flexibility: Low
Max RMSD: 2.1, Avg RMSD: 0.9
PDBFlex
90 % 19 19 1255
70 % 19 19 1269
50 % 19 19 1309
40 % 19 19 1294
30 % 19 19 1291

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures


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Rank PDB ID Entity ID Chains Description Details Taxonomy EC Number
1 2QJ2 1 A, B Hepatocyte growth factor residues 28-209 9606
2 5CP9 1 A, B Hepatocyte growth factor UNP residues 28-210 9606
3 5CS5 1 A, B Hepatocyte growth factor UNP residues 28-210 9606
4 1BHT 1 A, B HEPATOCYTE GROWTH FACTOR HEPES BUFFER MOLECULE BOUND IN KRINGLE BINDING POCKET NK1 FRAGMENT, HEPARIN BINDING DOMAIN PLUS C-MET BINDING DOMAIN 9606
5 5CT3 1 A, B Hepatocyte growth factor UNP residues 28-210 9606
6 5CS1 1 A, B Hepatocyte growth factor UNP residues 28-210 9606
7 5CSQ 1 A, B Hepatocyte growth factor UNP residues 28-210 9606
8 5CS9 1 A, B Hepatocyte growth factor UNP residues 28-210 9606
9 5CT1 1 A, B Hepatocyte growth factor UNP residues 28-210 9606
10 5CT2 1 A, B Hepatocyte growth factor UNP residues 28-210 9606
11 5COE 1 A, B Hepatocyte growth factor UNP residues 28-210 9606
12 5CS3 1 A, B Hepatocyte growth factor UNP residues 28-210 9606
13 1GMN 1 A, B HEPATOCYTE GROWTH FACTOR NK1 DIMER IN COMPLEX WITH HEPARIN MOLECULE NK1 9606
14 1GP9 1 A, B, C, D HEPATOCYTE GROWTH FACTOR NK1, RESIDUES 40-210 9606
15 1NK1 1 A, B PROTEIN (HEPATOCYTE GROWTH FACTOR PRECURSOR) NK1 9606
16 3MKP 1 A, B, C, D Hepatocyte growth factor UNP residues 28-210 9606
17 4D3C 1 A HEPATOCYTE GROWTH FACTOR RESIDUES 23-210 9606
18 1GMO 1 A, B, C, D, E, F, G, H HEPATOCYTE GROWTH FACTOR NK1 DIMER IN COMPLEX WITH HEPARIN MOLECULE NK1 9606