Sequence Similarity Clusters for the Entities in PDB 1GMO

Entity #1 | Chains: A,B,C,D,E,F,G,H
HEPATOCYTE GROWTH FACTOR protein, length: 183 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 2 6478
95 % 18 18 1144 Flexibility: Low
Max RMSD: 2.1, Avg RMSD: 0.9
PDBFlex
90 % 19 19 1123
70 % 19 19 1161
50 % 19 19 1203
40 % 19 19 1215
30 % 19 19 1194

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.