Sequence Similarity Clusters for the Entities in PDB 1GMM

Entity #1 | Chains: A
CBM6 protein, length: 133 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 2 35382
95 % 2 2 30219 Flexibility: No
Max RMSD: 0.5, Avg RMSD: 0.5
PDBFlex
90 % 2 2 29002
70 % 2 2 26067
50 % 2 2 22362
40 % 5 6 8000
30 % 26 28 1402

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures