Sequence Similarity Clusters for the Entities in PDB 1GMJ

Entity #1 | Chains: A,B,C,D
ATPASE INHIBITOR protein, length: 84 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 24791
95 % 1 2 15365 Flexibility: Low
Max RMSD: 3.5, Avg RMSD: 1.8
PDBFlex
90 % 1 2 15089
70 % 1 2 14134
50 % 1 2 12532
40 % 1 2 11354
30 % 1 2 9866

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures