Sequence Similarity Clusters for the Entities in PDB 1GME

Entity #1 | Chains: A,B,C,D
HEAT SHOCK PROTEIN 16.9B protein, length: 151 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 18823
95 % 1 1 17333 Flexibility: Medium
Max RMSD: 5.5, Avg RMSD: 3.8
PDBFlex
90 % 1 1 16919
70 % 1 1 15698
50 % 1 1 13773
40 % 1 1 12341
30 % 2 4 4438

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures


ACTION - (A) Select for download / view details OR (B) Select two chains for comparison
Rank PDB ID Entity ID Chains Description Details Taxonomy EC Number
1 1GME 1 A, B, C, D HEAT SHOCK PROTEIN 16.9B 4565