Sequence Similarity Clusters for the Entities in PDB 1GME

Entity #1 | Chains: A,B,C,D
HEAT SHOCK PROTEIN 16.9B protein, length: 151 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 19583
95 % 1 1 21238 Flexibility: Medium
Max RMSD: 5.5, Avg RMSD: 3.8
PDBFlex
90 % 1 1 20667
70 % 1 1 16546
50 % 1 1 14846
40 % 1 1 13776
30 % 1 1 14027

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures