Sequence Similarity Clusters for the Entities in PDB 1GME

Entity #1 | Chains: A,B,C,D
HEAT SHOCK PROTEIN 16.9B protein, length: 151 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 18083
95 % 1 1 16656 Flexibility: Medium
Max RMSD: 5.5, Avg RMSD: 3.8
PDBFlex
90 % 1 1 16281
70 % 1 1 15184
50 % 1 1 13345
40 % 1 1 11960
30 % 2 4 4298

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures