Sequence Similarity Clusters for the Entities in PDB 1GME

Entity #1 | Chains: A,B,C,D
HEAT SHOCK PROTEIN 16.9B protein, length: 151 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 23492
95 % 1 1 20178 Flexibility: Medium
Max RMSD: 5.5, Avg RMSD: 3.8
PDBFlex
90 % 1 1 19623
70 % 1 1 18104
50 % 1 1 15700
40 % 1 1 13955
30 % 2 4 4375

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures