Sequence Similarity Clusters for the Entities in PDB 1GME

Entity #1 | Chains: A,B,C,D
HEAT SHOCK PROTEIN 16.9B protein, length: 151 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 18860
95 % 1 1 17373 Flexibility: Medium
Max RMSD: 5.5, Avg RMSD: 3.8
PDBFlex
90 % 1 1 16958
70 % 1 1 15733
50 % 1 1 13807
40 % 1 1 12371
30 % 2 4 4452

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures