Sequence Similarity Clusters for the Entities in PDB 1GMC

Entity #1 | Chains: E
GAMMA-CHYMOTRYPSIN A protein, length: 13 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #2 | Chains: F
GAMMA-CHYMOTRYPSIN A protein, length: 131 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 27 38 755
95 % 27 38 1044
90 % 27 38 1063
70 % 27 40 1062
50 % 27 40 1105
40 % 28 42 1080
30 % 30 50 916
Entity #3 | Chains: G
GAMMA-CHYMOTRYPSIN A protein, length: 97 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 27 38 756
95 % 27 38 1045
90 % 27 38 1064
70 % 27 40 1067
50 % 29 43 1029
40 % 31 52 898
30 % 31 52 885
Entity #4 | Chains: B
PRO GLY ALA TYR PEPTIDE protein, length: 4 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.